InTAC-seq
InTAC-seq is a method of capturing epigenetic states of cells marked by particular transcription factors to better associate these factors with differentiation and lineage restriction in B-ALL. We aim to perform InTAC-seq to link transcription factor abundance to chromatin changes in primary human B-ALL patient specimens. Using InTAC-seq, we aim to profile chromatin accessibility landscapes associated using a combination of extracellular, cell surface markers and intracellular, transcriptional factors in patient-derived peripheral blood and bone marrow mononuclear cells to better characterize and identify B-ALL progenitors.
Targeting E-selectin biology to modulate the drug-tolerant persister state in B-ALL
Targeting E-selectin receptor/ligand interactions is one methodology of inhibiting the ability of B-ALL progenitor cells to localize in the bone marrow microenvironment and thus avoid/adapt to treatment. We aim to generate sialofucosylation profiles of canonical and non-canonical E-selectin ligands in primary human B-ALL patient specimens spanning different molecular subtypes to correlate these profiles with engraftment efficiency as a functional surrogate for bone marrow homing and leukemia-initiating capacity. Targeting E-selectin receptor/ligand interactions with standard therapy in combination with glycomimetic therapy, we aim to evaluate the impact in vivo glycomimetic antagonism on abrogating leukemogenesis and reducing minimal residual disease burden.